Switched to a new branch 'master'
M	git/ext/gitdb
branch 'master' set up to track 'origin/master'.
HEAD is now at d1297f65 Merge pull request #1198 from RyaxTech/replace-password-in-uri-by-stars
HEAD is now at d906f31a remove comment
HEAD is now at 6643a9fe Merge pull request #1202 from Yobmod/main
HEAD is now at 141cd651 adjust changelog prior to release
Submodule 'smmap' (https://github.com/gitpython-developers/smmap.git) registered for path 'git/ext/gitdb/gitdb/ext/smmap'
Cloning into '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap'...
Submodule path 'git/ext/gitdb/gitdb/ext/smmap': checked out '334ef84a05c953ed5dbec7b9c6d4310879eeab5a'
============================= test session starts ==============================
platform linux -- Python 3.10.9, pytest-7.2.1, pluggy-1.0.0 -- /usr/bin/python
cachedir: .pytest_cache
rootdir: /dev, configfile: null
collecting ... collected 522 items / 20 deselected / 502 selected

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=================================== FAILURES ===================================
___________________ TestPackedDBPerformance.test_correctness ___________________

self = <gitdb.test.performance.test_pack.TestPackedDBPerformance testMethod=test_correctness>

    def test_correctness(self):
        pdb = PackedDB(os.path.join(self.gitrepopath, "objects/pack"))
        # disabled for now as it used to work perfectly, checking big repositories takes a long time
        print("Endurance run: verify streaming of objects (crc and sha)", file=sys.stderr)
        for crc in range(2):
            count = 0
            st = time()
>           for entity in pdb.entities():

git/ext/gitdb/gitdb/test/performance/test_pack.py:112: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/ext/gitdb/gitdb/db/pack.py:179: in entities
    return [item[1] for item in self._entities]
git/ext/gitdb/gitdb/util.py:253: in __getattr__
    self._set_cache_(attr)
git/ext/gitdb/gitdb/db/pack.py:54: in _set_cache_
    self.update_cache(force=True)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <gitdb.db.pack.PackedDB object at 0x7f1b85aef430>, force = True

    def update_cache(self, force=False):
        """
        Update our cache with the actually existing packs on disk. Add new ones,
        and remove deleted ones. We keep the unchanged ones
    
        :param force: If True, the cache will be updated even though the directory
            does not appear to have changed according to its modification timestamp.
        :return: True if the packs have been updated so there is new information,
            False if there was no change to the pack database"""
>       stat = os.stat(self.root_path())
E       NotADirectoryError: [Errno 20] Not a directory: '/build/python-gitpython/src/gitpython/git/ext/gitdb/.git/objects/pack'

git/ext/gitdb/gitdb/db/pack.py:141: NotADirectoryError
----------------------------- Captured stderr call -----------------------------
Endurance run: verify streaming of objects (crc and sha)
________________ TestPackedDBPerformance.test_loose_correctness ________________

self = <gitdb.test.performance.test_pack.TestPackedDBPerformance testMethod=test_loose_correctness>

    def test_loose_correctness(self):
        """based on the pack(s) of our packed object DB, we will just copy and verify all objects in the back
        into the loose object db (memory).
        This should help finding dormant issues like this one https://github.com/gitpython-developers/GitPython/issues/220
        faster
        :note: It doesn't seem this test can find the issue unless the given pack contains highly compressed
        data files, like archives."""
        from gitdb.util import bin_to_hex
        pdb = GitDB(os.path.join(self.gitrepopath, 'objects'))
        mdb = MemoryDB()
>       for c, sha in enumerate(pdb.sha_iter()):

git/ext/gitdb/gitdb/test/performance/test_pack.py:89: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/ext/gitdb/gitdb/db/base.py:220: in sha_iter
    return chain(*(db.sha_iter() for db in self._dbs))
git/ext/gitdb/gitdb/util.py:253: in __getattr__
    self._set_cache_(attr)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <gitdb.db.git.GitDB object at 0x7f1b866a1000>, attr = '_dbs'

    def _set_cache_(self, attr):
        if attr == '_dbs' or attr == '_loose_db':
            self._dbs = list()
            loose_db = None
            for subpath, dbcls in ((self.packs_dir, self.PackDBCls),
                                   (self.loose_dir, self.LooseDBCls),
                                   (self.alternates_dir, self.ReferenceDBCls)):
                path = self.db_path(subpath)
                if os.path.exists(path):
                    self._dbs.append(dbcls(path))
                    if dbcls is self.LooseDBCls:
                        loose_db = self._dbs[-1]
                    # END remember loose db
                # END check path exists
            # END for each db type
    
            # should have at least one subdb
            if not self._dbs:
>               raise InvalidDBRoot(self.root_path())
E               gitdb.exc.InvalidDBRoot: /build/python-gitpython/src/gitpython/git/ext/gitdb/.git/objects

git/ext/gitdb/gitdb/db/git.py:62: InvalidDBRoot
_______________ TestPackedDBPerformance.test_pack_random_access ________________

self = <gitdb.test.performance.test_pack.TestPackedDBPerformance testMethod=test_pack_random_access>

    def test_pack_random_access(self):
        pdb = PackedDB(os.path.join(self.gitrepopath, "objects/pack"))
    
        # sha lookup
        st = time()
>       sha_list = list(pdb.sha_iter())

git/ext/gitdb/gitdb/test/performance/test_pack.py:32: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/ext/gitdb/gitdb/db/pack.py:106: in sha_iter
    for entity in self.entities():
git/ext/gitdb/gitdb/db/pack.py:179: in entities
    return [item[1] for item in self._entities]
git/ext/gitdb/gitdb/util.py:253: in __getattr__
    self._set_cache_(attr)
git/ext/gitdb/gitdb/db/pack.py:54: in _set_cache_
    self.update_cache(force=True)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <gitdb.db.pack.PackedDB object at 0x7f1b85aeea10>, force = True

    def update_cache(self, force=False):
        """
        Update our cache with the actually existing packs on disk. Add new ones,
        and remove deleted ones. We keep the unchanged ones
    
        :param force: If True, the cache will be updated even though the directory
            does not appear to have changed according to its modification timestamp.
        :return: True if the packs have been updated so there is new information,
            False if there was no change to the pack database"""
>       stat = os.stat(self.root_path())
E       NotADirectoryError: [Errno 20] Not a directory: '/build/python-gitpython/src/gitpython/git/ext/gitdb/.git/objects/pack'

git/ext/gitdb/gitdb/db/pack.py:141: NotADirectoryError
________________ TestPackStreamingPerformance.test_pack_writing ________________

self = <gitdb.test.performance.test_pack_streaming.TestPackStreamingPerformance testMethod=test_pack_writing>

    def test_pack_writing(self):
        # see how fast we can write a pack from object streams.
        # This will not be fast, as we take time for decompressing the streams as well
        ostream = CountedNullStream()
        pdb = PackedDB(os.path.join(self.gitrepopath, "objects/pack"))
    
        ni = 1000
        count = 0
        st = time()
>       for sha in pdb.sha_iter():

git/ext/gitdb/gitdb/test/performance/test_pack_streaming.py:44: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/ext/gitdb/gitdb/db/pack.py:106: in sha_iter
    for entity in self.entities():
git/ext/gitdb/gitdb/db/pack.py:179: in entities
    return [item[1] for item in self._entities]
git/ext/gitdb/gitdb/util.py:253: in __getattr__
    self._set_cache_(attr)
git/ext/gitdb/gitdb/db/pack.py:54: in _set_cache_
    self.update_cache(force=True)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <gitdb.db.pack.PackedDB object at 0x7f1b867b7910>, force = True

    def update_cache(self, force=False):
        """
        Update our cache with the actually existing packs on disk. Add new ones,
        and remove deleted ones. We keep the unchanged ones
    
        :param force: If True, the cache will be updated even though the directory
            does not appear to have changed according to its modification timestamp.
        :return: True if the packs have been updated so there is new information,
            False if there was no change to the pack database"""
>       stat = os.stat(self.root_path())
E       NotADirectoryError: [Errno 20] Not a directory: '/build/python-gitpython/src/gitpython/git/ext/gitdb/.git/objects/pack'

git/ext/gitdb/gitdb/db/pack.py:141: NotADirectoryError
_______________ TestPackStreamingPerformance.test_stream_reading _______________

self = <gitdb.test.performance.test_pack_streaming.TestPackStreamingPerformance testMethod=test_stream_reading>

    def test_stream_reading(self):
        # raise SkipTest()
        pdb = PackedDB(os.path.join(self.gitrepopath, "objects/pack"))
    
        # streaming only, meant for --with-profile runs
        ni = 5000
        count = 0
        pdb_stream = pdb.stream
        total_size = 0
        st = time()
>       for sha in pdb.sha_iter():

git/ext/gitdb/gitdb/test/performance/test_pack_streaming.py:71: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/ext/gitdb/gitdb/db/pack.py:106: in sha_iter
    for entity in self.entities():
git/ext/gitdb/gitdb/db/pack.py:179: in entities
    return [item[1] for item in self._entities]
git/ext/gitdb/gitdb/util.py:253: in __getattr__
    self._set_cache_(attr)
git/ext/gitdb/gitdb/db/pack.py:54: in _set_cache_
    self.update_cache(force=True)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <gitdb.db.pack.PackedDB object at 0x7f1b854cc1c0>, force = True

    def update_cache(self, force=False):
        """
        Update our cache with the actually existing packs on disk. Add new ones,
        and remove deleted ones. We keep the unchanged ones
    
        :param force: If True, the cache will be updated even though the directory
            does not appear to have changed according to its modification timestamp.
        :return: True if the packs have been updated so there is new information,
            False if there was no change to the pack database"""
>       stat = os.stat(self.root_path())
E       NotADirectoryError: [Errno 20] Not a directory: '/build/python-gitpython/src/gitpython/git/ext/gitdb/.git/objects/pack'

git/ext/gitdb/gitdb/db/pack.py:141: NotADirectoryError
_________ TestSubmodule.test_git_submodules_and_add_sm_with_new_commit _________

self = <test.test_submodule.TestSubmodule testMethod=test_git_submodules_and_add_sm_with_new_commit>
rwdir = '/tmp/test_git_submodules_and_add_sm_with_new_commitdpo6fo89'

    @skipIf(
        HIDE_WINDOWS_KNOWN_ERRORS,
        """FIXME on cygwin: File "C:\\projects\\gitpython\\git\\cmd.py", line 671, in execute
                raise GitCommandError(command, status, stderr_value, stdout_value)
            GitCommandError: Cmd('git') failed due to: exit code(128)
              cmdline: git add 1__Xava verbXXten 1_test _myfile 1_test_other_file 1_XXava-----verbXXten
              stderr: 'fatal: pathspec '"1__çava verböten"' did not match any files'
             FIXME on appveyor: see https://ci.appveyor.com/project/Byron/gitpython/build/1.0.185
                """,
    )
    @with_rw_directory
    def test_git_submodules_and_add_sm_with_new_commit(self, rwdir):
        parent = git.Repo.init(osp.join(rwdir, "parent"))
>       parent.git.submodule("add", self._small_repo_url(), "module")

test/test_submodule.py:742: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/cmd.py:741: in <lambda>
    return lambda *args, **kwargs: self._call_process(name, *args, **kwargs)
git/cmd.py:1315: in _call_process
    return self.execute(call, **exec_kwargs)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <git.cmd.Git object at 0x7f1b857fd300>
command = ['/usr/bin/git', 'submodule', 'add', '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap', 'module']
istream = None, with_extended_output = False, with_exceptions = True
as_process = False, output_stream = None, stdout_as_string = True
kill_after_timeout = None, with_stdout = True, universal_newlines = False
shell = None
env = {'BUILDTOOL': 'devtools', 'BUILDTOOLVER': '20230105-1-any', 'CFLAGS': '-march=x86-64 -mtune=generic -O2 -pipe -fno-plt...refix-map=/build/python-gitpython/src=/usr/src/debug/python-gitpython -flto=auto', 'CHOST': 'x86_64-pc-linux-gnu', ...}
max_chunk_size = 8192, strip_newline_in_stdout = True, subprocess_kwargs = {}
redacted_command = ['/usr/bin/git', 'submodule', 'add', '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap', 'module']
cwd = '/tmp/test_git_submodules_and_add_sm_with_new_commitdpo6fo89/parent'
inline_env = None, cmd_not_found_exception = <class 'FileNotFoundError'>
stdout_sink = -1, istream_ok = 'None'
proc = <Popen: returncode: 128 args: ['/usr/bin/git', 'submodule', 'add', '/build/p...>

    def execute(
        self,
        command: Union[str, Sequence[Any]],
        istream: Union[None, BinaryIO] = None,
        with_extended_output: bool = False,
        with_exceptions: bool = True,
        as_process: bool = False,
        output_stream: Union[None, BinaryIO] = None,
        stdout_as_string: bool = True,
        kill_after_timeout: Union[None, float] = None,
        with_stdout: bool = True,
        universal_newlines: bool = False,
        shell: Union[None, bool] = None,
        env: Union[None, Mapping[str, str]] = None,
        max_chunk_size: int = io.DEFAULT_BUFFER_SIZE,
        strip_newline_in_stdout: bool = True,
        **subprocess_kwargs: Any,
    ) -> Union[str, bytes, Tuple[int, Union[str, bytes], str], AutoInterrupt]:
        """Handles executing the command on the shell and consumes and returns
        the returned information (stdout)
    
        :param command:
            The command argument list to execute.
            It should be a string, or a sequence of program arguments. The
            program to execute is the first item in the args sequence or string.
    
        :param istream:
            Standard input filehandle passed to subprocess.Popen.
    
        :param with_extended_output:
            Whether to return a (status, stdout, stderr) tuple.
    
        :param with_exceptions:
            Whether to raise an exception when git returns a non-zero status.
    
        :param as_process:
            Whether to return the created process instance directly from which
            streams can be read on demand. This will render with_extended_output and
            with_exceptions ineffective - the caller will have
            to deal with the details himself.
            It is important to note that the process will be placed into an AutoInterrupt
            wrapper that will interrupt the process once it goes out of scope. If you
            use the command in iterators, you should pass the whole process instance
            instead of a single stream.
    
        :param output_stream:
            If set to a file-like object, data produced by the git command will be
            output to the given stream directly.
            This feature only has any effect if as_process is False. Processes will
            always be created with a pipe due to issues with subprocess.
            This merely is a workaround as data will be copied from the
            output pipe to the given output stream directly.
            Judging from the implementation, you shouldn't use this flag !
    
        :param stdout_as_string:
            if False, the commands standard output will be bytes. Otherwise, it will be
            decoded into a string using the default encoding (usually utf-8).
            The latter can fail, if the output contains binary data.
    
        :param env:
            A dictionary of environment variables to be passed to `subprocess.Popen`.
    
        :param max_chunk_size:
            Maximum number of bytes in one chunk of data passed to the output_stream in
            one invocation of write() method. If the given number is not positive then
            the default value is used.
    
        :param subprocess_kwargs:
            Keyword arguments to be passed to subprocess.Popen. Please note that
            some of the valid kwargs are already set by this method, the ones you
            specify may not be the same ones.
    
        :param with_stdout: If True, default True, we open stdout on the created process
        :param universal_newlines:
            if True, pipes will be opened as text, and lines are split at
            all known line endings.
        :param shell:
            Whether to invoke commands through a shell (see `Popen(..., shell=True)`).
            It overrides :attr:`USE_SHELL` if it is not `None`.
        :param kill_after_timeout:
            To specify a timeout in seconds for the git command, after which the process
            should be killed. This will have no effect if as_process is set to True. It is
            set to None by default and will let the process run until the timeout is
            explicitly specified. This feature is not supported on Windows. It's also worth
            noting that kill_after_timeout uses SIGKILL, which can have negative side
            effects on a repository. For example, stale locks in case of git gc could
            render the repository incapable of accepting changes until the lock is manually
            removed.
        :param strip_newline_in_stdout:
            Whether to strip the trailing `\n` of the command stdout.
        :return:
            * str(output) if extended_output = False (Default)
            * tuple(int(status), str(stdout), str(stderr)) if extended_output = True
    
            if output_stream is True, the stdout value will be your output stream:
            * output_stream if extended_output = False
            * tuple(int(status), output_stream, str(stderr)) if extended_output = True
    
            Note git is executed with LC_MESSAGES="C" to ensure consistent
            output regardless of system language.
    
        :raise GitCommandError:
    
        :note:
           If you add additional keyword arguments to the signature of this method,
           you must update the execute_kwargs tuple housed in this module."""
        # Remove password for the command if present
        redacted_command = remove_password_if_present(command)
        if self.GIT_PYTHON_TRACE and (self.GIT_PYTHON_TRACE != "full" or as_process):
            log.info(" ".join(redacted_command))
    
        # Allow the user to have the command executed in their working dir.
        try:
            cwd = self._working_dir or os.getcwd()  # type: Union[None, str]
            if not os.access(str(cwd), os.X_OK):
                cwd = None
        except FileNotFoundError:
            cwd = None
    
        # Start the process
        inline_env = env
        env = os.environ.copy()
        # Attempt to force all output to plain ascii english, which is what some parsing code
        # may expect.
        # According to stackoverflow (http://goo.gl/l74GC8), we are setting LANGUAGE as well
        # just to be sure.
        env["LANGUAGE"] = "C"
        env["LC_ALL"] = "C"
        env.update(self._environment)
        if inline_env is not None:
            env.update(inline_env)
    
        if is_win:
            cmd_not_found_exception = OSError
            if kill_after_timeout is not None:
                raise GitCommandError(
                    redacted_command,
                    '"kill_after_timeout" feature is not supported on Windows.',
                )
        else:
            cmd_not_found_exception = FileNotFoundError  # NOQA # exists, flake8 unknown @UndefinedVariable
        # end handle
    
        stdout_sink = PIPE if with_stdout else getattr(subprocess, "DEVNULL", None) or open(os.devnull, "wb")
        istream_ok = "None"
        if istream:
            istream_ok = "<valid stream>"
        log.debug(
            "Popen(%s, cwd=%s, universal_newlines=%s, shell=%s, istream=%s)",
            redacted_command,
            cwd,
            universal_newlines,
            shell,
            istream_ok,
        )
        try:
            proc = Popen(
                command,
                env=env,
                cwd=cwd,
                bufsize=-1,
                stdin=istream or DEVNULL,
                stderr=PIPE,
                stdout=stdout_sink,
                shell=shell is not None and shell or self.USE_SHELL,
                close_fds=is_posix,  # unsupported on windows
                universal_newlines=universal_newlines,
                creationflags=PROC_CREATIONFLAGS,
                **subprocess_kwargs,
            )
    
        except cmd_not_found_exception as err:
            raise GitCommandNotFound(redacted_command, err) from err
        else:
            # replace with a typeguard for Popen[bytes]?
            proc.stdout = cast(BinaryIO, proc.stdout)
            proc.stderr = cast(BinaryIO, proc.stderr)
    
        if as_process:
            return self.AutoInterrupt(proc, command)
    
        def _kill_process(pid: int) -> None:
            """Callback method to kill a process."""
            p = Popen(
                ["ps", "--ppid", str(pid)],
                stdout=PIPE,
                creationflags=PROC_CREATIONFLAGS,
            )
            child_pids = []
            if p.stdout is not None:
                for line in p.stdout:
                    if len(line.split()) > 0:
                        local_pid = (line.split())[0]
                        if local_pid.isdigit():
                            child_pids.append(int(local_pid))
            try:
                # Windows does not have SIGKILL, so use SIGTERM instead
                sig = getattr(signal, "SIGKILL", signal.SIGTERM)
                os.kill(pid, sig)
                for child_pid in child_pids:
                    try:
                        os.kill(child_pid, sig)
                    except OSError:
                        pass
                kill_check.set()  # tell the main routine that the process was killed
            except OSError:
                # It is possible that the process gets completed in the duration after timeout
                # happens and before we try to kill the process.
                pass
            return
    
        # end
    
        if kill_after_timeout is not None:
            kill_check = threading.Event()
            watchdog = threading.Timer(kill_after_timeout, _kill_process, args=(proc.pid,))
    
        # Wait for the process to return
        status = 0
        stdout_value: Union[str, bytes] = b""
        stderr_value: Union[str, bytes] = b""
        newline = "\n" if universal_newlines else b"\n"
        try:
            if output_stream is None:
                if kill_after_timeout is not None:
                    watchdog.start()
                stdout_value, stderr_value = proc.communicate()
                if kill_after_timeout is not None:
                    watchdog.cancel()
                    if kill_check.is_set():
                        stderr_value = 'Timeout: the command "%s" did not complete in %d ' "secs." % (
                            " ".join(redacted_command),
                            kill_after_timeout,
                        )
                        if not universal_newlines:
                            stderr_value = stderr_value.encode(defenc)
                # strip trailing "\n"
                if stdout_value.endswith(newline) and strip_newline_in_stdout:  # type: ignore
                    stdout_value = stdout_value[:-1]
                if stderr_value.endswith(newline):  # type: ignore
                    stderr_value = stderr_value[:-1]
    
                status = proc.returncode
            else:
                max_chunk_size = max_chunk_size if max_chunk_size and max_chunk_size > 0 else io.DEFAULT_BUFFER_SIZE
                stream_copy(proc.stdout, output_stream, max_chunk_size)
                stdout_value = proc.stdout.read()
                stderr_value = proc.stderr.read()
                # strip trailing "\n"
                if stderr_value.endswith(newline):  # type: ignore
                    stderr_value = stderr_value[:-1]
                status = proc.wait()
            # END stdout handling
        finally:
            proc.stdout.close()
            proc.stderr.close()
    
        if self.GIT_PYTHON_TRACE == "full":
            cmdstr = " ".join(redacted_command)
    
            def as_text(stdout_value: Union[bytes, str]) -> str:
                return not output_stream and safe_decode(stdout_value) or "<OUTPUT_STREAM>"
    
            # end
    
            if stderr_value:
                log.info(
                    "%s -> %d; stdout: '%s'; stderr: '%s'",
                    cmdstr,
                    status,
                    as_text(stdout_value),
                    safe_decode(stderr_value),
                )
            elif stdout_value:
                log.info("%s -> %d; stdout: '%s'", cmdstr, status, as_text(stdout_value))
            else:
                log.info("%s -> %d", cmdstr, status)
        # END handle debug printing
    
        if with_exceptions and status != 0:
>           raise GitCommandError(redacted_command, status, stderr_value, stdout_value)
E           git.exc.GitCommandError: Cmd('/usr/bin/git') failed due to: exit code(128)
E             cmdline: /usr/bin/git submodule add /build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap module
E             stderr: 'Cloning into '/tmp/test_git_submodules_and_add_sm_with_new_commitdpo6fo89/parent/module'...
E           fatal: transport 'file' not allowed
E           fatal: clone of '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap' into submodule path '/tmp/test_git_submodules_and_add_sm_with_new_commitdpo6fo89/parent/module' failed'

git/cmd.py:1109: GitCommandError
________________ TestSubmodule.test_list_only_valid_submodules _________________

self = <test.test_submodule.TestSubmodule testMethod=test_list_only_valid_submodules>
rwdir = '/tmp/test_list_only_valid_submodulesclw3mq1f'

    @with_rw_directory
    def test_list_only_valid_submodules(self, rwdir):
        repo_path = osp.join(rwdir, "parent")
        repo = git.Repo.init(repo_path)
>       repo.git.submodule("add", self._small_repo_url(), "module")

test/test_submodule.py:715: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
git/cmd.py:741: in <lambda>
    return lambda *args, **kwargs: self._call_process(name, *args, **kwargs)
git/cmd.py:1315: in _call_process
    return self.execute(call, **exec_kwargs)
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = <git.cmd.Git object at 0x7f1b855855a0>
command = ['/usr/bin/git', 'submodule', 'add', '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap', 'module']
istream = None, with_extended_output = False, with_exceptions = True
as_process = False, output_stream = None, stdout_as_string = True
kill_after_timeout = None, with_stdout = True, universal_newlines = False
shell = None
env = {'BUILDTOOL': 'devtools', 'BUILDTOOLVER': '20230105-1-any', 'CFLAGS': '-march=x86-64 -mtune=generic -O2 -pipe -fno-plt...refix-map=/build/python-gitpython/src=/usr/src/debug/python-gitpython -flto=auto', 'CHOST': 'x86_64-pc-linux-gnu', ...}
max_chunk_size = 8192, strip_newline_in_stdout = True, subprocess_kwargs = {}
redacted_command = ['/usr/bin/git', 'submodule', 'add', '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap', 'module']
cwd = '/tmp/test_list_only_valid_submodulesclw3mq1f/parent', inline_env = None
cmd_not_found_exception = <class 'FileNotFoundError'>, stdout_sink = -1
istream_ok = 'None'
proc = <Popen: returncode: 128 args: ['/usr/bin/git', 'submodule', 'add', '/build/p...>

    def execute(
        self,
        command: Union[str, Sequence[Any]],
        istream: Union[None, BinaryIO] = None,
        with_extended_output: bool = False,
        with_exceptions: bool = True,
        as_process: bool = False,
        output_stream: Union[None, BinaryIO] = None,
        stdout_as_string: bool = True,
        kill_after_timeout: Union[None, float] = None,
        with_stdout: bool = True,
        universal_newlines: bool = False,
        shell: Union[None, bool] = None,
        env: Union[None, Mapping[str, str]] = None,
        max_chunk_size: int = io.DEFAULT_BUFFER_SIZE,
        strip_newline_in_stdout: bool = True,
        **subprocess_kwargs: Any,
    ) -> Union[str, bytes, Tuple[int, Union[str, bytes], str], AutoInterrupt]:
        """Handles executing the command on the shell and consumes and returns
        the returned information (stdout)
    
        :param command:
            The command argument list to execute.
            It should be a string, or a sequence of program arguments. The
            program to execute is the first item in the args sequence or string.
    
        :param istream:
            Standard input filehandle passed to subprocess.Popen.
    
        :param with_extended_output:
            Whether to return a (status, stdout, stderr) tuple.
    
        :param with_exceptions:
            Whether to raise an exception when git returns a non-zero status.
    
        :param as_process:
            Whether to return the created process instance directly from which
            streams can be read on demand. This will render with_extended_output and
            with_exceptions ineffective - the caller will have
            to deal with the details himself.
            It is important to note that the process will be placed into an AutoInterrupt
            wrapper that will interrupt the process once it goes out of scope. If you
            use the command in iterators, you should pass the whole process instance
            instead of a single stream.
    
        :param output_stream:
            If set to a file-like object, data produced by the git command will be
            output to the given stream directly.
            This feature only has any effect if as_process is False. Processes will
            always be created with a pipe due to issues with subprocess.
            This merely is a workaround as data will be copied from the
            output pipe to the given output stream directly.
            Judging from the implementation, you shouldn't use this flag !
    
        :param stdout_as_string:
            if False, the commands standard output will be bytes. Otherwise, it will be
            decoded into a string using the default encoding (usually utf-8).
            The latter can fail, if the output contains binary data.
    
        :param env:
            A dictionary of environment variables to be passed to `subprocess.Popen`.
    
        :param max_chunk_size:
            Maximum number of bytes in one chunk of data passed to the output_stream in
            one invocation of write() method. If the given number is not positive then
            the default value is used.
    
        :param subprocess_kwargs:
            Keyword arguments to be passed to subprocess.Popen. Please note that
            some of the valid kwargs are already set by this method, the ones you
            specify may not be the same ones.
    
        :param with_stdout: If True, default True, we open stdout on the created process
        :param universal_newlines:
            if True, pipes will be opened as text, and lines are split at
            all known line endings.
        :param shell:
            Whether to invoke commands through a shell (see `Popen(..., shell=True)`).
            It overrides :attr:`USE_SHELL` if it is not `None`.
        :param kill_after_timeout:
            To specify a timeout in seconds for the git command, after which the process
            should be killed. This will have no effect if as_process is set to True. It is
            set to None by default and will let the process run until the timeout is
            explicitly specified. This feature is not supported on Windows. It's also worth
            noting that kill_after_timeout uses SIGKILL, which can have negative side
            effects on a repository. For example, stale locks in case of git gc could
            render the repository incapable of accepting changes until the lock is manually
            removed.
        :param strip_newline_in_stdout:
            Whether to strip the trailing `\n` of the command stdout.
        :return:
            * str(output) if extended_output = False (Default)
            * tuple(int(status), str(stdout), str(stderr)) if extended_output = True
    
            if output_stream is True, the stdout value will be your output stream:
            * output_stream if extended_output = False
            * tuple(int(status), output_stream, str(stderr)) if extended_output = True
    
            Note git is executed with LC_MESSAGES="C" to ensure consistent
            output regardless of system language.
    
        :raise GitCommandError:
    
        :note:
           If you add additional keyword arguments to the signature of this method,
           you must update the execute_kwargs tuple housed in this module."""
        # Remove password for the command if present
        redacted_command = remove_password_if_present(command)
        if self.GIT_PYTHON_TRACE and (self.GIT_PYTHON_TRACE != "full" or as_process):
            log.info(" ".join(redacted_command))
    
        # Allow the user to have the command executed in their working dir.
        try:
            cwd = self._working_dir or os.getcwd()  # type: Union[None, str]
            if not os.access(str(cwd), os.X_OK):
                cwd = None
        except FileNotFoundError:
            cwd = None
    
        # Start the process
        inline_env = env
        env = os.environ.copy()
        # Attempt to force all output to plain ascii english, which is what some parsing code
        # may expect.
        # According to stackoverflow (http://goo.gl/l74GC8), we are setting LANGUAGE as well
        # just to be sure.
        env["LANGUAGE"] = "C"
        env["LC_ALL"] = "C"
        env.update(self._environment)
        if inline_env is not None:
            env.update(inline_env)
    
        if is_win:
            cmd_not_found_exception = OSError
            if kill_after_timeout is not None:
                raise GitCommandError(
                    redacted_command,
                    '"kill_after_timeout" feature is not supported on Windows.',
                )
        else:
            cmd_not_found_exception = FileNotFoundError  # NOQA # exists, flake8 unknown @UndefinedVariable
        # end handle
    
        stdout_sink = PIPE if with_stdout else getattr(subprocess, "DEVNULL", None) or open(os.devnull, "wb")
        istream_ok = "None"
        if istream:
            istream_ok = "<valid stream>"
        log.debug(
            "Popen(%s, cwd=%s, universal_newlines=%s, shell=%s, istream=%s)",
            redacted_command,
            cwd,
            universal_newlines,
            shell,
            istream_ok,
        )
        try:
            proc = Popen(
                command,
                env=env,
                cwd=cwd,
                bufsize=-1,
                stdin=istream or DEVNULL,
                stderr=PIPE,
                stdout=stdout_sink,
                shell=shell is not None and shell or self.USE_SHELL,
                close_fds=is_posix,  # unsupported on windows
                universal_newlines=universal_newlines,
                creationflags=PROC_CREATIONFLAGS,
                **subprocess_kwargs,
            )
    
        except cmd_not_found_exception as err:
            raise GitCommandNotFound(redacted_command, err) from err
        else:
            # replace with a typeguard for Popen[bytes]?
            proc.stdout = cast(BinaryIO, proc.stdout)
            proc.stderr = cast(BinaryIO, proc.stderr)
    
        if as_process:
            return self.AutoInterrupt(proc, command)
    
        def _kill_process(pid: int) -> None:
            """Callback method to kill a process."""
            p = Popen(
                ["ps", "--ppid", str(pid)],
                stdout=PIPE,
                creationflags=PROC_CREATIONFLAGS,
            )
            child_pids = []
            if p.stdout is not None:
                for line in p.stdout:
                    if len(line.split()) > 0:
                        local_pid = (line.split())[0]
                        if local_pid.isdigit():
                            child_pids.append(int(local_pid))
            try:
                # Windows does not have SIGKILL, so use SIGTERM instead
                sig = getattr(signal, "SIGKILL", signal.SIGTERM)
                os.kill(pid, sig)
                for child_pid in child_pids:
                    try:
                        os.kill(child_pid, sig)
                    except OSError:
                        pass
                kill_check.set()  # tell the main routine that the process was killed
            except OSError:
                # It is possible that the process gets completed in the duration after timeout
                # happens and before we try to kill the process.
                pass
            return
    
        # end
    
        if kill_after_timeout is not None:
            kill_check = threading.Event()
            watchdog = threading.Timer(kill_after_timeout, _kill_process, args=(proc.pid,))
    
        # Wait for the process to return
        status = 0
        stdout_value: Union[str, bytes] = b""
        stderr_value: Union[str, bytes] = b""
        newline = "\n" if universal_newlines else b"\n"
        try:
            if output_stream is None:
                if kill_after_timeout is not None:
                    watchdog.start()
                stdout_value, stderr_value = proc.communicate()
                if kill_after_timeout is not None:
                    watchdog.cancel()
                    if kill_check.is_set():
                        stderr_value = 'Timeout: the command "%s" did not complete in %d ' "secs." % (
                            " ".join(redacted_command),
                            kill_after_timeout,
                        )
                        if not universal_newlines:
                            stderr_value = stderr_value.encode(defenc)
                # strip trailing "\n"
                if stdout_value.endswith(newline) and strip_newline_in_stdout:  # type: ignore
                    stdout_value = stdout_value[:-1]
                if stderr_value.endswith(newline):  # type: ignore
                    stderr_value = stderr_value[:-1]
    
                status = proc.returncode
            else:
                max_chunk_size = max_chunk_size if max_chunk_size and max_chunk_size > 0 else io.DEFAULT_BUFFER_SIZE
                stream_copy(proc.stdout, output_stream, max_chunk_size)
                stdout_value = proc.stdout.read()
                stderr_value = proc.stderr.read()
                # strip trailing "\n"
                if stderr_value.endswith(newline):  # type: ignore
                    stderr_value = stderr_value[:-1]
                status = proc.wait()
            # END stdout handling
        finally:
            proc.stdout.close()
            proc.stderr.close()
    
        if self.GIT_PYTHON_TRACE == "full":
            cmdstr = " ".join(redacted_command)
    
            def as_text(stdout_value: Union[bytes, str]) -> str:
                return not output_stream and safe_decode(stdout_value) or "<OUTPUT_STREAM>"
    
            # end
    
            if stderr_value:
                log.info(
                    "%s -> %d; stdout: '%s'; stderr: '%s'",
                    cmdstr,
                    status,
                    as_text(stdout_value),
                    safe_decode(stderr_value),
                )
            elif stdout_value:
                log.info("%s -> %d; stdout: '%s'", cmdstr, status, as_text(stdout_value))
            else:
                log.info("%s -> %d", cmdstr, status)
        # END handle debug printing
    
        if with_exceptions and status != 0:
>           raise GitCommandError(redacted_command, status, stderr_value, stdout_value)
E           git.exc.GitCommandError: Cmd('/usr/bin/git') failed due to: exit code(128)
E             cmdline: /usr/bin/git submodule add /build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap module
E             stderr: 'Cloning into '/tmp/test_list_only_valid_submodulesclw3mq1f/parent/module'...
E           fatal: transport 'file' not allowed
E           fatal: clone of '/build/python-gitpython/src/gitpython/git/ext/gitdb/gitdb/ext/smmap' into submodule path '/tmp/test_list_only_valid_submodulesclw3mq1f/parent/module' failed'

git/cmd.py:1109: GitCommandError
=============================== warnings summary ===============================
test/test_remote.py:43
  /build/python-gitpython/src/gitpython/test/test_remote.py:43: PytestCollectionWarning: cannot collect test class 'TestRemoteProgress' because it has a __init__ constructor (from: test/test_remote.py)
    class TestRemoteProgress(RemoteProgress):

test/test_submodule.py:34
  /build/python-gitpython/src/gitpython/test/test_submodule.py:34: PytestCollectionWarning: cannot collect test class 'TestRootProgress' because it has a __init__ constructor (from: test/test_submodule.py)
    class TestRootProgress(RootUpdateProgress):

test/test_util.py:66
  /build/python-gitpython/src/gitpython/test/test_util.py:66: PytestCollectionWarning: cannot collect test class 'TestIterableMember' because it has a __init__ constructor (from: test/test_util.py)
    class TestIterableMember(object):

../../../../usr/lib/python3.10/site-packages/_pytest/cacheprovider.py:433
  /usr/lib/python3.10/site-packages/_pytest/cacheprovider.py:433: PytestCacheWarning: could not create cache path /dev/.pytest_cache/v/cache/nodeids
    config.cache.set("cache/nodeids", sorted(self.cached_nodeids))

../../../../usr/lib/python3.10/site-packages/_pytest/cacheprovider.py:387
  /usr/lib/python3.10/site-packages/_pytest/cacheprovider.py:387: PytestCacheWarning: could not create cache path /dev/.pytest_cache/v/cache/lastfailed
    config.cache.set("cache/lastfailed", self.lastfailed)

../../../../usr/lib/python3.10/site-packages/_pytest/stepwise.py:56
  /usr/lib/python3.10/site-packages/_pytest/stepwise.py:56: PytestCacheWarning: could not create cache path /dev/.pytest_cache/v/cache/stepwise
    session.config.cache.set(STEPWISE_CACHE_DIR, [])

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=========================== short test summary info ============================
FAILED ../../../../dev/git/ext/gitdb/gitdb/test/performance/test_pack.py::TestPackedDBPerformance::test_correctness
FAILED ../../../../dev/git/ext/gitdb/gitdb/test/performance/test_pack.py::TestPackedDBPerformance::test_loose_correctness
FAILED ../../../../dev/git/ext/gitdb/gitdb/test/performance/test_pack.py::TestPackedDBPerformance::test_pack_random_access
FAILED ../../../../dev/git/ext/gitdb/gitdb/test/performance/test_pack_streaming.py::TestPackStreamingPerformance::test_pack_writing
FAILED ../../../../dev/git/ext/gitdb/gitdb/test/performance/test_pack_streaming.py::TestPackStreamingPerformance::test_stream_reading
FAILED ../../../../dev/test/test_submodule.py::TestSubmodule::test_git_submodules_and_add_sm_with_new_commit
FAILED ../../../../dev/test/test_submodule.py::TestSubmodule::test_list_only_valid_submodules
==== 7 failed, 453 passed, 42 skipped, 20 deselected, 6 warnings in 47.15s =====
==> ERROR: A failure occurred in check().
    Aborting...